Detailed gene information

Genes [306]

DCL1LHYGA2ox6MRG2CRY2ATPRMT10ATX2STOESD7, TIL1, ABO4NF-YC9, HAP5CPHYACIB4OTS2LWD1, ATAN11UBC1GAI, RGA2GA3OX1TPLCSTF77ARP4AFR2GIPFT1, MED25TEM1, EDF1CIB5CUL3AVOZ1GA2ox2SUF4FRL2RCD1FBH1GA2ox4CPK33GA2ox7FBH3, AKS1, BHLH122ASH2R, TROHTA9SPA4SPL4RRP6L1NF-YC3HUB2MED13, GCT, MAB2VIM1, ORTH2OTS1, ULP1DVIP5LDL1FTVIM2RGL1AT-STUbl4FKF1, ADO3TEM2, RAV2AP1CDF5CSTF64PHLAFR1SDG26, ASHH1FLM, MAF1, AGL27EFS, SDG8GA2ox1TPS1APL, WDY, FEGA2, ATKS1ELF7PRP8, SUS2, EMB33GA3OX2RGA1UBC2EFMELF8, VIP6ABH1, CBP80CPK6FDP, BZIP27PHYBVIL3, VEL2LKP2MIR156GFVE, MSI4GLK1, GPRI1FIO1GRP7, CCR2MED18SVPAGL17CLF, SDG1SUVR5MIR156AELF3ATCMIR172ATOE1, RAP2.7PUB12FLXUGT87A2ATX1, SDG27COP1SPL3FES1CDF4GA2ox3NF-YA4JMJ15, MEE27SRO1AS1HTA8NF-YB1, HAP3ASNZESD6, HOS1ELF4SPL9FBH4, AKS3VOZ2PIF4FPASDG7, ASSH3CKB4HUB1AHL22AGL6SOC1, AGL20BRM, CHR2LRB1SPA1PRR9CCA1RFI2HULK2AKIN10, SNRK1.1MBD9GASA5RGL2MYR2FLKGID1ACOL9FLD, RSI1MIR172CUBP13PIE1LDL2SPL5SPA3BRC1, TCP18VRN1DNFFIE1, FIS3JMJ30TICPHP, CDC73AtBMI1CVIL1, VRN5LWD2ICE1, SCRMSSRP1, HMG, NFDMYB30ARP6, SUF3, ESD1SUS4DCL3ATJ3HDA9JMJ32, JMJD5PUB13LUX, PCL1CDF3REF6, JMJ12UBP26WDR5ALNK2HTA11SMZAGL16INO80AGL18SPL15PIF5, PIL6CKB3LRB2, POB1GID1BHULK3MED12, CCT, CRPFRILIF2LDGA1AtNDXMED16, SFR6CRY1FBH2DET1, FUS2SPT16XAL2, AGL14NF-YB3, HAP3CESD4PHYDFCAVRN2PHYETSFJMJ14, PKDM7B, JMJ4GA2ox8EBSAGL19CAD2, RML1, GSH1AGL24PGI1MOS1GA20ox1FWA, HDG6WRKY34, MSP3ULT1HXK1, GIN2VIP3, SKI8VIL2, VEL1MIR156BSKB1, PRMT5MIR156CATH1CIB1FDAP2MRG1CSP2, GRP2BBX19SHL1, SHLHB16, ATHB16PRR7TFL1ELF6MIR172BSUC9UBP12FTIP1GA20OX3HAM2, HAG5, HAC11FLC, AGL25, FLFMIR156DEMF1MIR156ENF-YA1, HAP2BFYAGL15BAF60, CHC1COFRL1, SUF8RGL3TFL2, LHP1MYR1DCL4HUA2RUP2, EFO2PRR5FPF1MIR156FGID1CPHYCRRP6L2SEF, SWC6RVE2, CIR1VIM3, ORTH1CDF2HLP1ATXR7, SDG25IDD8, NUCGLK2CBP20YAF9A, TAF14B, GAS41CUL4NF-YB2, HAP3BADG1, APS1CIB2LATEPRMT4AEMF2, CYR1GA20ox2PGM1MIR156HZTLVIN3COL5MSI1SRR1PRR3TOE2SIZ1FUL, AGL8HDA5VIP4TOC1LFYFLX4, FLL4BFTCDF1HDA6, RTS1NF-YC4GIS5, EMB2780LNK1HAM1CDKC;2MAF2, AGL31MAF3, AGL70MAF4, AGL69MAF5, AGL68TOE3

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Publications

Hicks K A et al., 1996, Science
Zagotta M T et al., 1996, Plant J.
McWatters H G et al., 2000, Nature
Liu X L et al., 2001, Plant Cell
Covington M F et al., 2001, Plant Cell
Kim W et al., 2005, Plant Physiol.
Lu S X et al., 2012, Plant Physiol.
Box M S et al., 2015, Curr. Biol.

Appears in the following schemes

Temperature pathway
Circadian clock overview
Photoperiod pathway

Protein function

Encodes a transcription factor involved in the regulation of the circadian clock.

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Phenotype

Remarks:
elf3-1 single mutant is phototoperiod-insensitive, misexpresses GIGANTEA, and flowers at the same time under both SD and LD conditions. [Liu et al., 2001][Fowler et al., 1999]

Overexpressor:
ELF3 overexpressor is late flowering under LD conditions only. [Liu et al., 2001]

Single mutant:
elf3 single mutant is early flowering under both SD and LD conditions. [Lu et al., 2012][Liu et al., 2001][Zagotta et al., 1996]

Function:
May be a transcription factor part of a circadian clock input pathway. Acts within a zeitnehmer feedback loop and is involved in its own circadian regulation. Has no role in regulating circadian clock function in the dark. Part of a corepressor complex consisting of ELF4, ELF3, and LUX involved in the transcriptional regulation of APRR9. The activity of the protein may be decreased in long day conditions due to its interaction with phytochrome B (phyB). Can regulate the initiation of flowering independently of phyB. Also involved in responses to nematode parasitism, like the formation of the nematode feeding structure. [Data from UniProt]

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Regulators, targets and interactors

Downstream actors

causality
GI -- [Helfer et al., 2011][Yu et al., 2008][Kolmos et al., 2007] -- [View TAIR record]

PRR7 -- [Dixon et al., 2011][Helfer et al., 2011] -- [View TAIR record]

ELF4 -- [Helfer et al., 2011] -- [View TAIR record]

PIF5, PIL6 -- [Dixon et al., 2011][Nozue et al., 2007][Thines et al., 2010][Thines et al., 2014][Mizuno et al., 2014][Yamashino et al., 2003] -- [View TAIR record]

ELF3 -- [Helfer et al., 2011] -- [View TAIR record]

LUX, PCL1 -- [Helfer et al., 2011] -- [View TAIR record]

PIF4 -- [Dixon et al., 2011][Nozue et al., 2007][Nusinow et al., 2011][Thines et al., 2010][Thines et al., 2014][Mizuno et al., 2014][Raschke et al., 2015][Yamashino et al., 2003] -- [View TAIR record]

PRR9 -- [Dixon et al., 2011][Helfer et al., 2011] -- [View TAIR record]

BOA -- [Helfer et al., 2011] -- [View TAIR record]

Upstream actors

causality
ELF3 -- [Helfer et al., 2011] -- [View TAIR record]

LUX, PCL1 -- [Helfer et al., 2011][Nusinow et al., 2011] -- [View TAIR record]

BOA -- [Helfer et al., 2011] -- [View TAIR record]

ELF4 -- [Helfer et al., 2011] -- [View TAIR record]

RVE8 -- [Hsu et al., 2013] -- [View TAIR record]

Protein-protein interactions

SVP -- [Yoshida et al., 2009] -- [View TAIR record]

COP1 -- [Yu et al., 2008] -- [View TAIR record]


LUX, PCL1 -- [Helfer et al., 2011][Nusinow et al., 2011] -- [View TAIR record]

BBX19 -- [Wang et al., 2015] -- [View TAIR record]

ELF3 interaction network

Downstream and upstream flowering-related genes

Physical interactions with other flowering-related proteins